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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11191437 chr10:104637759 C/T 2.68E-8 487 15.63 17.33 19.1 KM Plot
THCA rs11191439 chr10:104638723 C/T 5.12E-9 490 18.5 17.68 15.2 KM Plot
THCA rs11191445 chr10:104651055 C/T 5.25E-9 488 15.2 17.73 32.1 KM Plot
THCA rs11191446 chr10:104651480 A/G 2.9E-8 488 15.48 17.33 19.1 KM Plot
THCA rs11191473 chr10:104710710 C/G 5.63E-9 489 15.17 17.73 32.1 KM Plot
THCA rs11191490 chr10:104745174 T/A 5.07E-9 489 15.2 17.78 32.1 KM Plot
THCA rs11191523 chr10:104792400 A/G 5.17E-9 488 15.23 17.68 32.1 KM Plot
THCA rs11191524 chr10:104793040 G/A 5.17E-9 488 15.23 17.68 32.1 KM Plot
THCA rs11191525 chr10:104793435 G/C 5.17E-9 488 15.23 17.68 32.1 KM Plot
THCA rs11191545 chr10:104829793 C/T 5.59E-9 490 15.32 17.63 32.1 KM Plot
THCA rs111917266 chr22:25484225 C/T 3.41E-7 489 15.77 16.63 7.87 KM Plot
THCA rs11196445 chr10:115469890 C/T 1.09E-6 490 15.77 16.67 13.83 KM Plot
THCA rs111974933 chr1:16274520 T/TG 0.000185 485 15.27 17.33 17.77 KM Plot
THCA rs111976464 chr2:201735042 C/A 0 482 16.4 15.17 2.47 KM Plot
THCA rs111977890 chr14:59744282 G/A 1.39E-8 490 16.38 12.62 5.45 KM Plot